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福建省猪源多黏菌素耐药基因mcr-1阳性细菌的耐药特性及分布特征
车勇良1, 陈秋勇1, 陈如敬,等1
福建省农业科学院 畜牧兽医研究所/福建省畜禽疫病防治工程技术研究中心
摘要:
【目的】了解福建省猪源mcr-1基因阳性细菌的流行性、耐药特性及分布特征。【方法】从福建省7个地市的21个猪场采集313份粪便样本,应用PCR方法筛选、分离和鉴定mcr-1基因阳性细菌;采用K-B琼脂扩散试验进行药敏检测,分析mcr-1基因阳性细菌的耐药性,并使用PCR方法分析其耐药表型;进一步采用多位点序列分型(MLST)方法鉴定mcr-1基因阳性大肠杆菌的类型,使用脉冲场凝胶电泳(PFGE)分析方法对mcr-1阳性大肠杆菌进行聚类分析,探明其分布特征和亲缘关系。【结果】从313份猪粪便中共分离获得43株mcr-1基因阳性细菌,其中大肠杆菌39株。耐药性结果显示,分离菌株对磺胺甲基异恶唑、氟苯尼考、链霉素、强力霉素、恩诺沙星、新霉素、阿莫西林、头孢噻肟、林可-壮观、亚胺培南、呋喃妥因、利奈唑胺和替加环素的耐药率分别为90.1%,83.7%,74.4%,67.4%,67.4%,58.1%,53.5%,39.5%,34.9%,11.6%,4.6%,0和0。磺胺类耐药基因中的sul1、sul2sul3基因检出率较高,分别达到81.4%,90.7%和74.4%;喹诺酮类耐药基因中仅有qnrSaac(6′)-Ib-cr被检出,其检出率分别为51.2%和30.2%;氯霉素类耐药基因中Cat2cmlA基因的检出率较高,分别达到86.0%和74.4%;氟苯尼考耐药基因(floR)的检出率为83.7%;金属β-内酰胺酶耐药基因(NDM-1)的检出率为23.2%;多药耐药基因(cfr)的检出率为7.0%;而替加环素耐药基因(tet(X))未被检出。39株mcr-1基因阳性大肠杆菌除了4株不能分型外,其他35株共分为19个ST型,具有高度多样性,其中ST10为优势型,共有9株菌株。PFGE图谱显示,39株mcr-1基因阳性大肠杆菌共获得30种PFGE谱型,具有多态性特征,分为6组克隆群。【结论】福建猪源mcr-1基因阳性细菌主要为大肠杆菌,少部分为肠杆菌科其他菌株,且分离菌株具有明显的多重耐药性;mcr-1基因阳性大肠杆菌在地域分布上具有多态性和高度多样性特点。
关键词:  多黏菌素  耐药性  耐药基因  猪源mcr-1基因阳性菌  福建省
DOI:
分类号:
基金项目:国家自然科学基金项目(31872502);福建省农业科学院科研项目(AGY2018-6);福建省5511协同创新工程重点项目(XTCXGC2021008)
Resistance characteristics and distribution of polymyxin-resistant mcr-1 gene positive bacteria from swine in Fujian
CHE Yongliang,CHEN Qiuyong,CHEN Rujing,et al
Abstract:
【Objective】This study aims at understanding the resistance characteristics and distribution of mcr-1 gene positive bacteria in Fujian.【Method】A total of 313 fecal samples from 21 pig farms in 7 cities of Fujian were collected,and mcr-1 gene positive bacteria was screened,isolated and identified by PCR.The drug sensitive was tested by K-B agar diffusion test,and the resistance phenotype was analyzed by PCR method.The sequence type (ST) of mcr-1 gene positive E.coli was determined by multilocus sequence typing (MLST) method,and cluster analysis using pulsed field gel electrophoresis (PFGE) was performed to determine the distribution and phylogenetic relationships of mcr-1 gene positive E.coli.【Result】A total of 43 strains of mcr-1 gene positive bacteria were isolated from 313 pig manure,including 39 strains of E.coli.The drug sensitive test showed that the resistance rates of these isolates to sulfamethoxazole,florfenicol,streptomycin,doxycycline,enrofloxacin,neomycin,amoxicillin,cefotaxime,linco spectacular,imipenem,nitrofurantoin,linezolid and tegacyclin were 90.1%,83.7%,74.4%,67.4%,67.4%,58.1%,53.5%,39.5%,34.9%,11.6% and 4.6%,0 and 0,respectively.The detection rates of sul1,sul2 and sul3 genes were 81.4%,90.7% and 74.4%,respectively.Among quinolone resistance genes,only qnrs and aac(6′)-Ib-cr were detected with detection rates of 51.2% and 30.2%.The detection rates of Cat2 and cmlA genes in chloramphenicol resistance genes were 86.0% and 74.4%.The detection rate of florfenicol resistance gene was 83.7%.The detection rates of NDM-1 and cfr gene were 23.2% and 7.0%.The tegacyclin resistance gene (tet(X)) was not detected.Among the 39 strains,35 of mcr-1 gene positive E.coli with high diversity were divided into 19 ST types.The ST10 type was dominant with a total of 9 strains.PFGE map showed that these 39 mcr-1 gene positive E.coli obtained 30 PFGE patterns in 6 clone groups with polymorphic characteristics.【Conclusion】The mcr-1 gene positive bacteria from swine in Fujian were mainly E.coli with multiple drug resistance and a few were other strains of Enterobacteriaceae.The mcr-1 gene positive E.coli showed characteristics of polymorphism and high diversity in regional distribution.
Key words:  polyxycin  resistance characteristics  resistance gene  mcr-1 gene positive bacteria from swine  Fujian province