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小麦叶片非顺序和顺序衰老数字基因表达谱分析
李亚东1, 曹翠兰1, 丁虹茹,等1
西北农林科技大学 生命科学学院
摘要:
【目的】从转录水平揭示小麦叶片顺序和非顺序衰老的形成机制及其在小麦生产中的应用价值。【方法】以顺序衰老小麦(NR9405)和非顺序衰老小麦(温麦19)为材料,应用数字基因表达谱技术对两种衰老类型小麦旗叶在扬花后25 d、30 d和32 d 的基因表达量进行检测,筛选花后25 d和30 d,30 d和32 d旗叶的差异表达基因,并对差异表达基因进行GO富集分析。【结果】顺序衰老小麦NR9405花后25 d与30 d相比,差异表达基因共计6 659个,其中上调表达基因3 404个,下调表达基因3 255个;花后30 d与32 d相比,差异表达基因共计4 058个,其中上调表达基因3 017个,下调表达基因1 041个。非顺序衰老小麦温麦19花后25 d与 30 d相比,差异表达基因共计13 609个,其中上调表达基因7 454个,下调表达基因6 155个;花后30 d与32 d相比,差异表达基因共计6 321个,其中上调表达基因2 669个,下调表达基因3 652个。上调基因显著富集的主要GO条目有:环境胁迫响应、脂肪酸α-氧化、细胞死亡、DNA 分解代谢、自噬、水解酶、转移酶、转运、丝氨酸/苏氨酸蛋白磷酸酶等。下调基因显著富集的GO条目有:光合作用、光的捕获、光合电子传递链、叶绿素生物合成过程、叶绿体机体等。在小麦叶片非顺序衰老过程中,自噬、海藻糖生物合成过程、海藻糖磷酸酶、蔗糖合成酶等相关基因极显著上调表达,有利于保持叶片水分,促进叶片碳氮的转运,提高小麦产量。【结论】小麦叶片的非顺序衰老与自噬、水解酶和丝氨酸/苏氨酸蛋白磷酸酶基因的极显著上调表达密切相关。
关键词:  小麦生理  顺序衰老  非顺序衰老  数字基因表达谱  GO条目
DOI:
分类号:
基金项目:国家自然科学基金项目“叶片逆向衰老小麦生态变异特征及其形成机理”(31170366)
Digital gene expression profiling analysis of wheat leaf sequential and non sequential senescence
LI Yadong,CAO Cuilan,DING Hongru,et al
Abstract:
【Objective】The formation mechanism and application value in wheat production of wheat leaf sequential and non sequential senescence were revealed from transcriptional level.【Method】The gene expression levels in flag leaves of two senescence types of wheat at 25 d,30 d and 32 d after flowering were detected by digital gene expression profiling technology,and differentially expressed genes between 25 d and 30 d as well as between 30 d and 32 d after flowering were screened and analyzed by GO enrichment.【Result】In sequential senescence wheat of NR9405 between 25 d and 30 d after flowering,there were 6 659 differentially expressed genes,of which 3 404 were up-regulated and 3 255 were down regulated.Between 30 d and 32 d after flowering,there were 4 058 differentially expressed genes,including 3 017 up-regulated genes and 1 041 down regulated genes.In non-sequential senescence wheat of Wenmai 19 between 25 d and 30 d after flowering,the total number of differentially expressed genes was 13 609,of which 7 454 were up-regulated and 6 155 were down regulated.Between 30 d and 32 d after flowering,the number of differentially expressed genes was 6 321,of which 2 669 were up regulated and 3 652 were down regulated.The GO terms with significantly enriched-up regulation genes included response to stress,fatty acid oxidation,cell death,DNA catabolic process,autophagy,hydrolase activity,transferase activity,transport activity,and serine/threonine protein phosphatase activity.The GO terms significantly enriched down regulation genes included photosynthesis,light harvesting,photosynthetic electron transport chain,chlorophyll biosynthesis processes,and chloroplast.During non sequential senescence of wheat leaves,autophagy,trehalose biosynthesis,trehalose phosphatase activity and sucrose synthase activity were significantly up regulated,which were beneficial to maintain leaf water,promote leaf carbon and nitrogen transport,and increase wheat yield.【Conclusion】 The non sequential senescence of wheat leaves was closely related to significant up regulation of autophagy,hydrolase and serine/threonine protein phosphatase genes.
Key words:  wheat physiology  sequential senescence  non-sequential senescence  digital gene expression profiling  GO term