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IGFB-1基因全长cDNA的克隆及表达分析
丁为群, 梁宏伟, 邹桂伟,等
昆明理工大学 生命科学与技术学院
摘要:
【目的】克隆鲢胰岛素样生长因子结合蛋白1(IGFBP-1)基因,分析其编码蛋白的结构与功能,并分析低氧胁迫下该基因在鲢肝脏中的表达情况。【方法】采用cDNA末端快速扩增技术(Rapid amplification of cDNA ends,RACE)扩增鲢IGFBP-1基因的全长 cDNA,通过半定量RT-PCR法对鲢肌肉、心脏、脑、肾脏、肝脏、腮和脾等组织器官IGFBP-1 mRNA的表达水平进行检测,利用Real-time PCR法检测急性低氧胁迫0,2,4,6,8,10和12 h后鲢肝脏组织中IGFBP-1表达量的变化。【结果】鲢IGFBP-1全长cDNA为1 081 bp,具有73 bp的5′非编码区(Untranslated Regions,UTR)、789 bp的开放读码框(Open reading frame,ORF),以及219 bp的3′UTR,编码含262个氨基酸的蛋白质。RT-PCR结果表明,IGFBP-1在肌肉、心脏、脑、肾脏、肝脏、腮和脾等7种组织中均有表达,其中在肝脏中的表达量最高,心脏和肌肉次之,在脑中的表达量最低;Real-time PCR结果表明,在低氧胁迫6 h时,IGFBP-1 cDNA在肝脏中的表达量显著增高,随后略有降低但仍显著高于未进行低氧胁迫处理组。【结论】克隆得到鲢IGFBP-1全长cDNA,该基因在肝脏组织中大量表达;随着低氧胁迫时间的延长,鲢肝脏中IGFBP-1 mRNA表达量升高,达最大值后继续低氧胁迫其表达量略有降低。
关键词:  白鲢  低氧  IGFBP-1  RACE  Real-time PCR
DOI:
分类号:
基金项目:国家自然科学基金项目(31101894);公益性行业(农业)科研专项(200903045)
Molecular cloning and expression analysis of the full length cDNA of IGFBP1 gene in Hypophthalmichthys molitrix
DING Weiqun, LIANG Hongwei, ZOU Guiwei,et al
Kunming University of Science and Technology,et al
Abstract:
【Objective】The study aimed to clone the cDNA of IGFBP-1 and analyze the encoded amino acids and the expression level under hypoxia in liver.【Method】The method of Rapid amplication of cDNA ends(RACE)was used to obtain the complete IGFBP-1 cDNA sequence.Semi-quantitative RT-PCR was performed using the tissues of muscle,heart,brain,kidney,liver,gill and spleen of silver carp.The expression patterns of IGFBP-1 under the condition of acute hypoxia for 0,2,4,6,8,10 and 12 h was analyzed by real-time PCR.【Result】The full-length cDNA of IGFBP-1 was 1 081 bp and the open reading frame was 789 nucleotides flanked by a 73 nucleotides of 5′-UTR and a 219 nucleotides of 3′-UTR.The ORF encoded a predicted polypeptide of 262 amino acids.RT-PCR showed that IGFBP-1 mRNA was expressed in muscle,heart,brain,kidney,liver,gill and spleen and showed high expression in liver,heart and muscle and low expression in brain.Real-time PCR revealed that in liver,the expression level increased significantly at 6 hours under hypoxia,and decreased a little after then but kept at a high level compared to the control group.【Conclusion】A full-length cDNA of IGFBP-1 was cloned.IGFBP-1 mRNA was abundantly expressed in liver and the expression level increased after acute hypoxia.The peak was at 6 h after hypoxia and it slightly decreased after the peak.
Key words:  Hypophthalmichthys molitrix  hypoxic  IGFBP-1  RACE  Real-time PCR