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BMPRA基因cDNA的克隆及组织表达谱分析
张小辉1,2, 张路培1, 许尚忠1,2
1.中国农业科学院 北京畜牧兽医研究所;2.西北农林科技大学 动物科技学院
摘要:
[目的]克隆牛BMPRA基因cDNA全长,以进行生物信息学分析和组织表达谱研究.[方法]运用生物信息学方法,结合RT-PCR和SMART RACE技术,对牛BMPRA基因进行cDNA全长克隆和生物信息学分析,并通过RT-PCR方法进行了组织表达谱研究.[结果]克隆得到了牛BMPRA基因4 067 bp的cDNA全长序列,通过核酸序列分析发现,该基因编码532个氨基酸,与人、黑猩猩、小鼠、大鼠、犬和红原鸡在核酸序列上分别有91%,93%,89%,88%,91%和82%的同源性;在氨基酸序列上分别有97%,95%,96%,95%,97%和91%的同源性.通过生物信息学分析发现,牛BMPRA蛋白包含一个信号肽序列和一个跨膜区序列,其成熟蛋白可能位于细胞膜上.在牛卵巢、肝、肌肉、小肠、脂肪、子宫、肾脏、心肌、肺、胰腺、睾丸、乳腺、瘤胃、脾脏、淋巴、胸腺等组织中都检测到有BMPRA基因表达.[结论]牛BMPRA基因是一个功能重要、进化保守的基因,具有广泛的组织表达谱.
关键词:    BMPRA基因  cDNA克隆  组织表达谱
DOI:
分类号:S852.659.5 Q786
基金项目:国家农业科技跨越计划(2004跨20)
Cloning and tissue expression analysis of cDNA encoding the cattle BMPRA gene
SHANG Shu-wen  HOU Ji-bo  XU Gong-bao  NIU Ming-fu  WANG Xiu-qing  HE Jia-hui  CHEN Pu-yan  JIANG Ping
Abstract:
【Objective】 The study was to clone and analyze the full-length cDNA sequence of the cattle BMPRA gene and the expression in 12 tissues.【Method】 The BMPRA gene full-long cDNA was cloned by RT-PCR,and SMART RACE and analyzed by bioinformatics ways.【Result】 The expressions were tested in 12 tissues by RT-PCR.The cattle BMPRA gene full-long cDNA is 4 067 bp,which encodes 532 amino acids and shares 91%,93%,89%,88%,91% and 82% similarity in nucleic acid sequences and 97%,95%,96%,95%,97% and 91% similarity in amino acid sequences with human,chimpanzee,mouse,rat,dog and red jungle fowl,respectively.The cattle BMPRA protein has a signal peptide and a transmembrane domain.The mature protein is located in cell membrance by informatics analysis.The BMPRA gene are expressed in ovary,liver,skeleton muscle,small intestine,fat,uterus,kidney,heart,lung,pancreas,testis,galactophore,rumen,spleen,lymph and thymus gland.【Conclusion】 The BMPRA is an important and conservative gene,which is broadly expressed in all kinds of tissues.
Key words:  cattle  BMPRA  cDNA clone  tissue expression analysis